{"text_format":"2","workbook":"xls","n_sheets":2,"sheets":["Dot Plots","Id matrix"],"not_rendered":{"charts":0,"images":0,"macros":0,"external_links":1,"defined_names":0,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1904","formulas":"cached_only"}

{"sheet":"Dot Plots","index":0,"n_rows":74,"n_cols":68,"rows_kept":74,"cut":false,"hidden":false,"merged":[],"flags":["formulas_cached_only"]}
["Enter sequences in cells B2 and B3"]
["To analyze sequences longer than 30 bases, copy formulas in each of the four plots across and down."]
["Seq 1 (horiz)","acgtggccatatatcgccacgt"]
["Seq 2 (vert)","acgtggccatatatcgccacgt"]
["Window size",3,null,null,"Current maximum window size is 23.  To increase this parameter, make identity matrix (on second sheet) the desired max window size."]
["Mismatch limit",0,null,null,"Dot is black if window centered at that cell contains no more than this number of mismatches."]
["Is DNA?",true,null,null,"Enter TRUE if sequences are DNA, and FALSE otherwise."]
[]
[]
[null,null,null,"Identity",{"$nulls":33},"Sliding Window Similarity"]
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[null,null,null,"Identity to Reverse Complement",{"$nulls":33},"Sliding Window Similarity to Reverse Complement"]
[null,"Reversed:",null,null,"t","g","c","a","c","c","g","c","t","a","t","a","t","a","c","c","g","g","t","g","c","a","","","","","","","",""]
[null,"Rev comp:",null,null,"A","C","G","T","G","G","C","G","A","T","A","T","A","T","G","G","C","C","A","C","G","T","","","","","","","","",{"$nulls":4},"A","C","G","T","G","G","C","G","A","T","A","T","A","T","G","G","C","C","A","C","G","T","","","","","","","",""]
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{"sheet":"Id matrix","index":1,"n_rows":14,"n_cols":13,"rows_kept":14,"cut":false,"hidden":false,"merged":[],"flags":["formulas_cached_only"]}
["Identity matrix (#rows and #columns = max window size)"]
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